LOC_Os02g57370

Expression Profile

RGAP LOCUS ID LOC_Os02g57370
RAP-DB ID Os02g0819100
Function DHHC zinc finger domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 4

2) CELLO Prediction
localization PlasmaMembrane
score 3.998

3) NUCPRED Prediction
localization Non Nuclear
score 0.05

4) Y-Loc Prediction
localization Chloroplast
score 6
confidence value 0.46
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsDHHC1|OsPAT15
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.092
NLS score -0.47
Protein Sequence >LOC_Os02g57370.1 protein
MARRRGSAAAAAASPAVVGAVSVLALVYYSTVFVFLDHWLGLGNAAGAAHAAAFSLVVAACFFSFFCAAAADPGSVPASFAPDAEDPQRQGLKSRYCDKC
CMYKPSRTHHCKVCKRCVLKMDHHCVWINNCVGYANYKSFIICVLNATIGSLYSFVVFLFDLFQTEHEYDVPYVKVIHVLVGVLLFFLSLTIGSLLCWHI
YLLCHNMTTIEYREATRAKWLAQKSGQKYRHRFDLGTRKNIQMIMGPNILCWLCPTATGHLKDGTEFQITNN

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Molecular Function
GO Term binding
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No