LOC_Os02g57290

Expression Profile

RGAP LOCUS ID LOC_Os02g57290
RAP-DB ID Os02g0817900
Function cytochrome P450, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization PlasmaMembrane
score 1.213

3) NUCPRED Prediction
localization Non Nuclear
score 0.46

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.42
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) CYP97A4
Function assigned as per literature CYP97A4 is involved in lutein biosynthesis
Subcellular localization as per literature Chloroplasts
Cells used for localization experiment Tobacco mesophyll protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 22470056
Reference of localization https://academic.oup.com/pcp/article/53/6/987/1806812
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.101
NLS score 0.58
Protein Sequence >LOC_Os02g57290.1 protein
MSSATSVSAFAMAATSSAAAAAPPPCRLLGSGQAHLRLPPSAAAAAASARRRLLLRCAASGGNGKGGGGDGSGSDPVLEERRRRRQAELAARIASGEFTA
QGPAWIAPLAVGLAKLGPPGELAAALLTKVAGGGGPEIPQAVGSMSAVTGQAFFIPLYDLFLTYGGIFRLNFGPKSFLIVSDPAIAKHILRDNSKAYSKG
ILAEILEFVMGTGLIPADGEIWRVRRRAIVPAMHQKYVTAMISLFGYASDRLCQKLDKAATDGEDVEMESLFSRLTLDVIGKAVFNYDFDSLSYDNGIVE
AVYVTLREAEMRSTSPIPTWEIPIWKDISPRQKKVNEALALINKTLDELIDICKRLVEEEDLQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTML
IAGHETSAAVLTWTFYLLSKYPNVMAKLQDEADTVLGDRLPTIEDVKKLKYTTRVINESLRLYPQPPVLIRRSIEEDMLGGYPIGRGEDIFISVWNLHHC
PKHWDGADVFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFATFETVVATAMLVRRFDFQMAPGAPPVEMTTGATIHTTEGLKMTVTRRTKPPVI
PNLEMKVISDSPENMSTTTSMPVSAASIASGEDQQGQVSATRI

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term lipid metabolic process
4
GO Category Molecular Function
GO Term catalytic activity
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Molecular Function
GO Term oxygen binding
7
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES