LOC_Os02g57260

Expression Profile

RGAP LOCUS ID LOC_Os02g57260
RAP-DB ID Os02g0817700
Function 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Chloroplast
score 1.775

3) NUCPRED Prediction
localization Non Nuclear
score 0.05

4) Y-Loc Prediction
localization Cytoplasm
score 97
confidence value 0.82
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Osl57
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.112
NLS score -0.22
Protein Sequence >LOC_Os02g57260.1 protein
MEKAIDRQRVLLAHLLPSSSSDQSLLSASACAAGDSAAYQRTSAYGDDVVVVAAYRTPICKAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVG
TVLGPGSQRAIECRAAAFYAGVPENVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMSVNAMGWEGQVNPKVNEVQKAQDCLLPMGITSENV
AHRYGVTRQEQDQAAAESHRRAAAATAAGKFKDEIVPVPTKIVDPKTGEEKKVVISVDDGIRPGTTASGLAKLKPVFRKDGTTTAGNSSQVSDGAGAVLL
MRRDVAMKKGLPILGVFRSFAAVGVDPAVMGVGPAVAIPAAVKSAGLQIEDIDLFELNEAFASQFVYCCNKLGLDRSKVNVNGGAIALGHPLGATGARCV
ATLLNEMKRRGRDCRFGVVTMCIGSGMGAAAVFERGDSVDQFSNVRHH

GO Analysis
1
GO Category Biological Process
GO Term response to endogenous stimulus
2
GO Category Biological Process
GO Term signal transduction
3
GO Category Biological Process
GO Term response to stress
4
GO Category Cellular comBiological Processonent
GO Term membrane
5
GO Category Biological Process
GO Term cellular process
6
GO Category Biological Process
GO Term lipid metabolic process
7
GO Category Biological Process
GO Term metabolic process
8
GO Category Cellular comBiological Processonent
GO Term peroxisome
9
GO Category Cellular comBiological Processonent
GO Term vacuole
10
GO Category Biological Process
GO Term catabolic process
11
GO Category Cellular comBiological Processonent
GO Term nucleolus
12
GO Category Molecular Function
GO Term transferase activity
13
GO Category Biological Process
GO Term biosynthetic process
14
GO Category Cellular comBiological Processonent
GO Term mitochondrion
15
GO Category Biological Process
GO Term cellular component organization
16
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No