LOC_Os02g57190

Expression Profile

RGAP LOCUS ID LOC_Os02g57190
RAP-DB ID Os02g0816900
Function Myosin head domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization Nuclear
score 3.01

3) NUCPRED Prediction
localization Nuclear
score 0.84

4) Y-Loc Prediction
localization Cytoplasm
score 98
confidence value 0.89
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) osmyoXIB
Function assigned as per literature ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations
Subcellular localization as per literature cytoplasm
Cells used for localization experiment transgenic rice roots and anthers
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 17289016
Reference of localization https://www.sciencedirect.com/science/article/pii/S001216060700022X?via%3Dihub
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.141
NLS score 0.21
Protein Sequence >LOC_Os02g57190.1 protein
MLCAAPPEELKRYKLGDPRTFHYLNQSNCYKLEGLDESKEYLETRKAMDIIGISSEEQEAIFRVVAAILHLGNVEFAEGDDGESSKPKDEKSLFHLKTAA
ELFMCDEKALEDSLCKRIIVTRDENIVKTLDPEAAKGSRDALAKTVYSRLFDWLVDKINKSIGQDPNSKCLIGVLDIYGFESFKTNSFEQFCINLTNEKL
QQHFNQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMLPRSTHETFAQKLYQTFKNNKRFTKPKLSRSDFTICHYAGDVTYQT
ELFLDKNKDYVVAEHQALLSASQCSFVSGLFPLLSEDSSKSSKFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPNNILKPSIFENQNVLQQLRCGGVME
AIRISCAGYPTRRTFYEFIDRFGILAPDVLSGSSDEIAAVRRLLEKVDLQGYQIGKTKVFLRAGQMAELDARRNEVLGRSANMIQRKVRSFLAQKNFIKL
QRSAVQLQTICRGELARKIYQNLRREAASLRIQTCYRMHAARKAYNELSASAVTIQSALRGMVARKELHFRQQTKAAIVIQSRCRQFLARLYYSRTKKAA
ITTQCAWRGKVARKELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRADLEEAKSQENAKLQATLQEVQQQYKETQEMLVKEREAAKKAAEVA
PVVKEVPVIDTELMNKLRDENDKLKTLVSSLEKKIDDTEKKYEETNKISEERLQKAMDAETKIVDLNMAMLRLQEKLSNMESEEKVQRQALLSSPVKSMS
EHLSIPIVPKNLENGFHEVEDPKEPQSAPPAIKDYGNGDPKLRKSCVDRQLENVDALIDCVSKNLGYCGGKPVAAFTIYKCLLHWKSFEAEKTSVFDRLI
QLIGSAIENEEDNDNLAYWLSNTSSLLFLLQRSLKAAGAPGSVSRKKPPQPTSLFGRMAQGLRSASFVNMHVEATDVVRQVEAKYPALLFKQQLTAYVEK
IYGIIRDNIKKELSSLISLCIQAPRTMKASMLRMSGRLSGQAQSNHWQRIIESLDILLKKLQDNHVPPVLAQKVFTQIFSYINVQLFNSLLLRRECCSFS
NGEYVKAGLAELELWCAKATTEYAAASWDELKHIRQAVGFLVIFQKFRISYDEIVNDLCPILSVQQLYRICTQYWDDKYNTQSVSSDVLSNMRVLMTEDS
NNAESSSFLLDDNSSIPFSVDDITNSIQEKDFTDVKPAEELLENPAFQFLQD

GO Analysis
1
GO Category Biological Process
GO Term cellular process
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term motor activity
4
GO Category Molecular Function
GO Term protein binding
5
GO Category Cellular comBiological Processonent
GO Term peroxisome
6
GO Category Biological Process
GO Term anatomical structure morphogenesis
7
GO Category Biological Process
GO Term cell differentiation
8
GO Category Biological Process
GO Term multicellular organismal development
9
GO Category Biological Process
GO Term cell growth
10
GO Category Cellular comBiological Processonent
GO Term cytoskeleton
Presence of Splice variants No