LOC_Os02g55570

Expression Profile

RGAP LOCUS ID LOC_Os02g55570
RAP-DB ID Os02g0799100
Function shugoshin-1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 10

2) CELLO Prediction
localization Nuclear
score 4.231

3) NUCPRED Prediction
localization Nuclear
score 0.99

4) Y-Loc Prediction
localization Nuclear
score 87.06
confidence value 0.15
Number Of Software Predicting Nucleus 4
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSGO1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.166
NLS score 1.02
Protein Sequence >LOC_Os02g55570.1 protein
MAAAAGAAARGGGVIPAGKGGSLRSPGKPVVLADITNTGRPNPTGSVHAIADVLKENAKLRHLLAERNKVIEVSRVELQKIRLALQAMQQKNLQLVQANS
QMFAEINQGKDRIKLLQHELACTIAVLKVKGSELEKMSKTSNNQQNRAKILEKKTRSSKCAPTKAHQMAAGSIREHLVEIQSVPSYTSCHEPPQDKTNKR
CTNRRKSESCEVTMDTNTVQHSCRPHVEYNGSSHDDDPRKTRRRRSARLNPGSFEVAEICDKLHEDATVPSAPSSNVPKLQEPNAGKDMICGGKMKSLQK
ELPCDAIAQVVEAPELKKKRSMHTQKEVYLEEIQEAGSSVAGGEAHKFDIEDPEPPRKSMRIDANKRKLESFESRLASNKEDCINAICDSTSSVPIQHEQ
KRKLSRRKSSRLDPGPWEVTNGTFEIVQEDTVAPSAPSSSNALIEQTKNDMQNDRSCSTKPSDEQVIGRRSSVGRPSRRAAEKIVSYKEVPLNIKMRRP

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Cellular comBiological Processonent
GO Term intracellular
4
GO Category Biological Process
GO Term cell cycle
Presence of Splice variants No