LOC_Os02g53490

Expression Profile

RGAP LOCUS ID LOC_Os02g53490
RAP-DB ID Os02g0775100
Function cation efflux family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 4

2) CELLO Prediction
localization PlasmaMembrane
score 2.091

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Nuclear
score 85.05
confidence value 0.6
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) MTP8.2
Function assigned as per literature MTP8.1 is involved in Manganese detoxification in the shoots in rice
Subcellular localization as per literature Tonoplast
Cells used for localization experiment onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28633293
Reference of localization https://academic.oup.com/pcp/article-abstract/58/9/1573/3867369?redirectedFrom=fulltext
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 3
Number of Bipartite 0
Basic residues % 0.112
NLS score 0.56
Protein Sequence >LOC_Os02g53490.1 protein
MDGDDRRTPLLGGEGGSTRPPSLRRRDSARSLRSTFLSRLPDKVRGGGDPERPAADVDLTRAKGLSQGEKEYYEKQLATLKIFEEVEALCMPGEFESDAE
VLELEDKEQKQSESAMKISNYANIILLVFKVYATIKTGSMAIAASTLDSLLDFLAGGILYFTHLTMKSVNIYKYPIGKLRVQPVGIIVFAAIMATLGFQV
LIQAIEQLVENKAGEKMTPEQLIWLYSIMLSATVVKLALYIYCRSSGNSIVQAYAKDHYFDVVTNVVGLVAAVLGDKFFWWIDPVGAVLLAVYTIVNWSG
TVYENAVTLVGQCAPSDMLQKLTYLAMKHDPRVRRVDTVRAYSFGALYFVEVDIELSEDMRLGEAHSIGESLQDKIEKLPEVERAFVHVDFESTHKPEHR
VRSRLPSTEP

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term transport
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term transporter activity
Presence of Splice variants No