LOC_Os02g53160

Expression Profile

RGAP LOCUS ID LOC_Os02g53160
RAP-DB ID Os02g0771400
Function tyrosine phosphatase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 9

2) CELLO Prediction
localization Cytoplasmic
score 3.008

3) NUCPRED Prediction
localization Non Nuclear
score 0.27

4) Y-Loc Prediction
localization Cytoplasm
score 59
confidence value 0.87
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPFA-DSP2
Function assigned as per literature  OsPFA-DSP2 and AtPFA-DSP4 act as negative regulators of the pathogen response in transgenic plants
Subcellular localization as per literature Cytoplasm and nucleus
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 22514699
Reference of localization http://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0034995&type=printable
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.118
NLS score -0.47
Protein Sequence >LOC_Os02g53160.1 protein
MQLEISPRQRSQQQKEEEGEHQQRAGEEAVGAVFSIEPWVDAAAVLVPPLNFAEVNDGIFRSGFPAADNFAFLLSLKLRSIVYLCPEPYPEENTRFLEQN
GIKLHQFGIDGSKELLVNIPEEKIREALKVILDVRNQPVLIHCKRGKHRTGCVVGCLRKLQKWCLTSVFDEYQHFAAAKARSTDQRFMELFDTSSLMHLT
ASQC

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No