LOC_Os02g51320

Expression Profile

RGAP LOCUS ID LOC_Os02g51320
RAP-DB ID Os02g0747900
Function helix-loop-helix DNA-binding domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 7

2) CELLO Prediction
localization Nuclear
score 3.087

3) NUCPRED Prediction
localization Non Nuclear
score 0.6

4) Y-Loc Prediction
localization Nuclear
score 98.47
confidence value 0.39
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category bHLH

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) PGL2|OsBUL1|OsbHLH173
Function assigned as per literature OsBUL1 in the presence of LO9-177 forms a possible trimeric complex for cell elongation in the lamina joint of rice
Subcellular localization as per literature OsBUL1 was localized with LO9-177 Iin Nucleus and cytoplasm
Cells used for localization experiment Rice protoplast cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 27879391
Reference of localization http://www.plantphysiol.org/content/173/1/688.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.159
NLS score -0.13
Protein Sequence >LOC_Os02g51320.1 protein
MSSRRSSRGSISEEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSILRS

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term nucleus
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No