LOC_Os02g51180

Expression Profile

RGAP LOCUS ID LOC_Os02g51180
RAP-DB ID Os02g0746000
Function cullin, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 9

2) CELLO Prediction
localization Nuclear
score 2.306

3) NUCPRED Prediction
localization Non Nuclear
score 0.73

4) Y-Loc Prediction
localization Nuclear
score 83.37
confidence value 0.55
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCUL3a
Function assigned as per literature OsCUL3a negatively regulates cell death and immunity by degrading OsNPR1 in rice
Subcellular localization as per literature Nucleus and cytoplasm
Cells used for localization experiment Rice protoplast and N. benthamiana leaves
NUCLEAR or Not Nuclear NUCLEAR
PMID 28100706
Reference of localization http://www.plantcell.org/content/29/2/345.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 3
Number of Bipartite 1
Basic residues % 0.152
NLS score 1.39
Protein Sequence >LOC_Os02g51180.1 protein
MSGGGPPKKRNFKIELFKHRVELDPKYAERTWKVLEHAIHEIYNHNASGLSFEELYRSAYNMVLHKYGEKLYDGLERTMTWRLKEISKSIEAAQGGLFLE
ELNAKWMDHNKALQMIRDILMYMDRTYVPQSRRTPVHELGLNLWRDHIIHSPMIHSRLLDTLLDLIHRERMGEMINRGLMRSITKMLMDLGAAVYQDDFE
KPFLDVTASFYSGESQEFIECCDCGNYLKKSERRLNEEMERVSHYLDSGTEAKITSVVEKEMIANHMHRLVHMENSGLVNMLVDDKYDDLARMYNLFRRV
FDGLSTIRDVMTSYLRETGKQLVTDPERLKDPVEFVQRLLNEKDKHDKIINVAFGNDKTFQNALNSSFEYFINLNNRSPEFISLYVDDKLRKGLKGATEE
DVEVILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSMIVKLKTECGYQFTSKLEGMFTDMKTSQDTMIDFYAKKSEELGDGPTLDVHIL
TTGSWPTQPCPPCNLPTEILAICDKFRTYYLGTHSGRRLTWQTNMGTADIKATFGKGQKHELNVSTYQMCVLMLFNSTDGLTYKDIEQDTAIPASDLKRC
LQSLACVKGKNVLRKEPMSKDISEDDTFYFNDKFTSKLVKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNSIVAEVTKQLQA
RFMPNPVVIKKRIESLIEREFLERDKADRKLYRYLA

GO Analysis
1
GO Category Biological Process
GO Term protein modification process
2
GO Category Biological Process
GO Term flower development
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Molecular Function
GO Term protein binding
5
GO Category Biological Process
GO Term protein metabolic process
6
GO Category Biological Process
GO Term catabolic process
7
GO Category Biological Process
GO Term cellular process
8
GO Category Cellular comBiological Processonent
GO Term cytosol
9
GO Category Cellular comBiological Processonent
GO Term intracellular
10
GO Category Biological Process
GO Term reproduction
11
GO Category Biological Process
GO Term post-embryonic development
12
GO Category Biological Process
GO Term cell cycle
13
GO Category Biological Process
GO Term embryo development
14
GO Category Biological Process
GO Term response to abiotic stimulus
Presence of Splice variants No