LOC_Os02g50970

Expression Profile

RGAP LOCUS ID LOC_Os02g50970
RAP-DB ID Os02g0743500
Function protein kinase domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 5.5

2) CELLO Prediction
localization Nuclear
score 2.763

3) NUCPRED Prediction
localization Nuclear
score 0.87

4) Y-Loc Prediction
localization Nuclear
score 97.96
confidence value 0.65
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) DSM1
Function assigned as per literature DSM1 may act as an early signal regulating the responses to drought stress in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment transgenic rice root tips and rice protoplast
NUCLEAR or Not Nuclear NUCLEAR
PMID 20007444
Reference of localization http://www.plantphysiol.org/content/152/2/876.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.112
NLS score -0.22
Protein Sequence >LOC_Os02g50970.1 protein
MKNFFRKLHIGEGSGDGASSSPPPPPSSRKGSGGVGGNHHLHAEQRQPSASAVSSWLDSVPGRPQPPTPSTPSEAEGSPFSSSVGSGAEERRQSVAAERR
RSQEEEWERRRSQEEEAVREMRRSQEEDEVEERVIRESSEAEERKRVREKEDDDLEEFQLQLVLEMSARDNPEEMEIEVAKQISLGFCPPQSSTAEALAA
RYWNFNALGYDDRISDGFYDLYVTGNGPASITMPSLKDLRAQSLSHRVNWEAVLVHRGEDPELMKLDQTALIMSLELRESKPSEFVGNDLVQKLAGLVAR
HMGGTFFDSEGMLVKYQKMMRYLRTSIGSVVVPLGQLKIGLARHRALLFKVLADNIGIPCRLLKGRQYTGSDDGALNIVKFDDGREFIVDLVADPGTLIP
SDGAVLSTEFEESSFSNNHHFNKDNDIRQLGSSNSLSNSACSSFECELLDRRSTWINVGPSDSDGATTSQTSKNNQQNTLSDSFGILSVSTFTSENRPIT
NESRSTDDIAAAKNKERSSVTINSSSTSPSPSSPEVGSTPAVRRMKVKDISEYMINAAKENPQLAQKIHEVLLENGVVAPPDLFSEDSMEEPKDLIVYDT
TLFQSKDEMKKRMNELGSREYADRGHGPLLPHHPGHELPSKVPHRAPLDSLKPVEGLGIDHPPDIQDNTSFISQYEPSAPPQEASSQLTKQLPVTAAAVA
TAAVVASSMVVAAAKSNNDVNFDVPVAAAATVTAAAVVATTAAVSKQYEHLEPGNQLHSLPSPSEGNESIEKSADEFWDKQNFEIDHGQDNTLDQEKDSA
EVRQDAERTSDKSSGTESAKSEITLDDVAEFEIQWEEITIGERIGLGSFGEVYRGEWHGTEVAVKKFLQQDISSDALEEFRTEVRIIKRLRHPNVVLFMG
AITRVPNLSIVTEFLPRGSLFRLIHRPNNQLDERKRLRMALDVARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSKMKNKTFLSSRSTAGTA
EWMAPEVLRNEPSDEKCDVFSYGVILWELCTLLQPWEGMNAMQVVGAVGFQNRRLDIPDNTDPAIAEIIAKCWQTDPKLRPSFADIMASLKPLLKNMTAQ
APRQRVQQTDE

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term kinase activity
4
GO Category Molecular Function
GO Term signal transducer activity
5
GO Category Biological Process
GO Term signal transduction
6
GO Category Biological Process
GO Term response to stress
7
GO Category Biological Process
GO Term response to abiotic stimulus
8
GO Category Biological Process
GO Term protein modification process
Presence of Splice variants No