LOC_Os02g50730

Expression Profile

RGAP LOCUS ID LOC_Os02g50730
RAP-DB ID Os02g0740700
Function metalloendoproteinase 1 precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Extracellular
score 1.636

3) NUCPRED Prediction
localization Non Nuclear
score 0.06

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.99
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMMP1
Function assigned as per literature OsMMP1 is in growth, organ differentiation, and development in relation to cell wall modification
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment tobacco cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29426868
Reference of localization https://www.nature.com/articles/s41598-018-20070-4
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.062
NLS score -0.47
Protein Sequence >LOC_Os02g50730.1 protein
MGASTSPRLALLVVVAAAAFVFVSPAMAFPMGLPATANPFPNPWSAFQNLSGCHAGEEREGLGRLKDYLSHFGYLPPPPSSSPYSDAFDDSLEAAIAAYQ
RNFGLNATGELDTDTVDQMVAPRCGVADVINGTSTMDRNSSAAALRGRHLYSYFPGGPMWPPFRRNLRYAITATSATSIDRATLSAVFARAFSRWAAATR
LQFTEVSSASNADITIGFYSGDHGDGEAFDGPLGTLAHAFSPTDGRFHLDAAEAWVASGDVSTSSSFGTAVDLESVAVHEIGHLLGLGHSSVPDSIMYPT
IRTGTRKVDLESDDVLGIQSLYGTNPNFKGVTPTSPSTSSREMDGSAAAAGIRPWSGFVGLVVPAVVLLLAP

GO Analysis
1
GO Category Biological Process
GO Term protein metabolic process
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term hydrolase activity
4
GO Category Molecular Function
GO Term binding
5
GO Category Cellular comBiological Processonent
GO Term membrane
Presence of Splice variants No