LOC_Os02g50350

Expression Profile

RGAP LOCUS ID LOC_Os02g50350
RAP-DB ID Os02g0736400
Function dihydroorotate dihydrogenase protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 9

2) CELLO Prediction
localization Cytoplasmic
score 1.476

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.53
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsDHODH1
Function assigned as per literature OsDHODH1 gene is involved in salt and drought tolerance in rice
Subcellular localization as per literature Cytosol
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 19723241
Reference of localization https://onlinelibrary.wiley.com/doi/full/10.1111/j.1744-7909.2009.00853.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.116
NLS score -0.47
Protein Sequence >LOC_Os02g50350.1 protein
MESLTLRASPSTAAPLRRVPGRRHAAVSVRASAGAGEPDLSVRVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAEKVINVTPRYARL
RADPNGSTKSPIIGWQNIELISDRPLETMLNEFKQLKKEYPDRILIGSIMEEYNKAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAVGQDCDLLE
EVCGWINEKATVPVWAKMTPNITDITKPARISLKSGCEGVSAINTIMSVMGINLKTLRPEPCVEGYSTPGGYSARAVHPIALAKVMQIARMMKEEFADGQ
SLSAIGGVETGNDAAEFILLGADTVQVCTGVMMHGYGLVKKLCAELQDFMRQHNFSSIEDFRGASLPYFTTHTDLVHRQREAINQRKAIRKGLESDKDWT
GDGFVKETESMVSN

GO Analysis
1
GO Category Biological Process
GO Term response to extracellular stimulus
2
GO Category Biological Process
GO Term cell communication
3
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
4
GO Category Biological Process
GO Term catabolic process
5
GO Category Molecular Function
GO Term catalytic activity
6
GO Category Biological Process
GO Term biosynthetic process
7
GO Category Cellular comBiological Processonent
GO Term plastid
8
GO Category Biological Process
GO Term metabolic process
Presence of Splice variants YES