LOC_Os02g50040

Expression Profile

RGAP LOCUS ID LOC_Os02g50040
RAP-DB ID Os02g0733300
Function endoglucanase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization extr
score 8

2) CELLO Prediction
localization Extracellular
score 1.001

3) NUCPRED Prediction
localization Non Nuclear
score 0.14

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 1
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGH9B1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.102
NLS score -0.47
Protein Sequence >LOC_Os02g50040.1 protein
MLAASLRVEAVAVVAAAVLVLLLSPAAVVVVAGQHDYGDALHKSILFFEGQRSGRLPPDQRLRWRRDSGLHDGAAASVDLTGGYYDAGDNVKFGFPMAFT
ATLMSWGLIDFGRSFGPHKEEARKAVRWATDYLMKATAKPNTVYVQVGDAFRDHSCWERPEDMDTPRTVYKVDPSHPGSDVAAETAAALAAGSIVFRDAD
PAYSKRLLDRAIAVFEFADKYRGPYSSSLHDAVCPCYCDFSGYKDELLWGAAWLHKASRRREYREYIKKNEVVLGASESINEFGWDNKHAGINVLISKEV
LMGKDEYFQSFRVNADNFMCSLLPGISNHPQIQYSPGGLLFKVGGSNMQHVTSLSFLLLAYSNYLSHAGARVSCGAGGSASPTQLRRVAKRQVDYILGDN
PLRMSYMVGYGARFPRRIHHRGSSLPSVAAHPARIGCKGGAAYYASAAPNPNLLVGAVVGGPSDATDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHP
NPAEWADD

GO Analysis
1
GO Category Biological Process
GO Term biological_process
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Biological Process
GO Term cell growth
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No