LOC_Os02g49720

Expression Profile

RGAP LOCUS ID LOC_Os02g49720
RAP-DB ID Os02g0730000
Function aldehyde dehydrogenase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Mitochondrial
score 1.093

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.64
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ALDH2a|OsALDH2B5
Function assigned as per literature ALDH2a is involved in the submergence tolerance of rice
Subcellular localization as per literature Mitochondria
Cells used for localization experiment suspension-cultured tobacco BY-2 cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 11027709
Reference of localization http://www.plantphysiol.org/content/124/2/587.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.103
NLS score -0.47
Protein Sequence >LOC_Os02g49720.1 protein
MAARRAASSLLSRGLIARPSAASSTGDSAILGAGSARGFLPGSLHRFSAAPAAAATAAATEEPIQPPVDVKYTKLLINGNFVDAASGKTFATVDPRTGDV
IARVAEGDAEDVNRAVAAARRAFDEGPWPRMTAYERCRVLLRFADLIEQHADEIAALETWDGGKTLEQTTGTEVPMVARYMRYYGGWADKIHGLVVPADG
PHHVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNAVVLKTAEQTPLSALFVASLLHEAGLPDGVLNVVSGFGPTAGAALSSHMGVDKLAFTGSTG
TGKIVLELAARSNLKPVTLELGGKSPFIVMDDADVDQAVELAHRALFFNQGQCCCAGSRTFVHERVYDEFVEKARARALQRVVGDPFRTGVEQGPQIDGE
QFKKILQYVKSGVDSGATLVAGGDRAGSRGFYIQPTVFADVEDEMKIAQEEIFGPVQSILKFRFATLEFPRIPSDRDRLSTGIYTNTLRAMCSTVEEVVR
RANATPYGLAAGVFTQRLDAANTLARALRVGTVWVNTYDVFDAAVPFGGYKMSGVGREKGVYSLRNYLQTKAVVTPIKDAAWL

GO Analysis
1
GO Category Molecular Function
GO Term catalytic activity
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Cellular comBiological Processonent
GO Term mitochondrion
Presence of Splice variants YES