LOC_Os02g48560

Expression Profile

RGAP LOCUS ID LOC_Os02g48560
RAP-DB ID Os02g0716500
Function fatty acid desaturase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 6

2) CELLO Prediction
localization ER
score 2.195

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.43
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsFAD2|OsFAD2-1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.082
NLS score -0.47
Protein Sequence >LOC_Os02g48560.1 protein
MLLNSCIRNLLLIGLVARYFCSCGVSVLLHYNIAQIAPSDPTTILQSILTFSSPAIVIVVVSSKMGAGGRMTEKEREEQQKLLGRAGNGAAVQRSPTDKP
PFTLGQIKKAIPPHCFQRSVIKSFSYVVHDLVIVAALLYFALVMIPVLPSGMEFAAWPLYWIAQGCVLTGVWVIAHECGHHAFSDYSVLDDIVGLVLHSS
LLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPYVYHNPIGRLVHIFVQLTLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFIS
DVGVVSAGLALFKLSSAFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYH
AMEATKAIRPILGEYYQFDPTPVAKATWREAKECIYVEPEDNKGVFWYNNKF

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
2
GO Category Molecular Function
GO Term catalytic activity
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term lipid metabolic process
Presence of Splice variants YES