LOC_Os02g48330

Expression Profile

RGAP LOCUS ID LOC_Os02g48330
RAP-DB ID Os02g0713900
Function 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Mitochondrial
score 1.15

3) NUCPRED Prediction
localization Non Nuclear
score 0.14

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.58
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) HMGRI
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.107
NLS score -0.47
Protein Sequence >LOC_Os02g48330.1 protein
MDVRRGGGGGRIVGAARRALTWGALPLPMRITNGLAMVSLVLSSCDLLRLCSDRERPLGGREFATVVYLVSLFAHPDAPATTTGDDDDGQGGSRRARPAA
AEPAPMHGHGGGMMEADDEEIVAAVASGALPSHRLESRLGDCRRAARLRREALRRVTGRGVEGLPFDGMDYQAILGQCCEMPVGYVQLPVGVAGPLLLDG
REYHVPMATTEGCLVASVNRGCRAISASGGAFSVLLRDAMSRAPAVKLPSAMRAAELKAFAEAPANFELLAAVFNSCSWQLEPSTQYRRNSMGCIYGQVS
WFHGYLFA

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term lipid metabolic process
4
GO Category Cellular comBiological Processonent
GO Term cell
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants No