LOC_Os02g47360

Expression Profile

RGAP LOCUS ID LOC_Os02g47360
RAP-DB ID Os02g0702000
Function PPR repeat domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 12

2) CELLO Prediction
localization Nuclear
score 1.274

3) NUCPRED Prediction
localization Non Nuclear
score 0.45

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.54
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OSOTP51
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.116
NLS score -0.47
Protein Sequence >LOC_Os02g47360.1 protein
MATTSPCAAPSPSLRCPLALSHPFASPPPPPALRLAGPKLLPGRLAVSPPPGIPAVASALESLILDLDDDEEDEDEETEFGLFQGEAWAAADEREAVRSP
ELVVPELEELPEQWRRSRIAWLCKELPAYKHSTFTRILNAQRKWITQDDATYVAVHCLRIRNNDAAFRVYSWMVRQHWFRFNFALATRVADCLGRDGKVE
KCREVFEAMVKQGRVPAESTFHILIVAYLSVPKGRCLEEACTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKYNLKQAEFVYHNVVTTNLDVHKDV
YAGLIWLHSYQDVIDRERIIALRKEMKQAGFDEGIDVLVSVMRAFSKEGNVAETEATWHNILQSGSDLPVQAYVCRMEAYARTGEPMKSLDMFKEMKDKN
IPPNVASYHKIIEIMTKALEVDIVEQLMNEFIESDMKHLMPAFLDLMYMYMDLDMHEKLELTFLKCIARCRPNRILYTIYLESLVKVGNIEKAEEVFGEM
HNNGMIGTNTKSCNIMLRGYLSAEDYQKAEKVYDMMSKKKYDVQADSLEKLQSGLLLNKKVIKPKTVSMKLDQEQREILIGLLLGGTRMESYAQRGVHIV
HFQFQEDSNAHSVLRVHIHERFFEWLSSASRSFDDGSKIPYQFSTIPHQHFSFFVDQFFLKGQPVLPKLIHRWLTPRVLAYWFMFGGSKLPSGDIVLKLS
GGNSEGVERIVNSLHTQSLTSKVKRKGRFFWIGFQGSNAESFWRIIEPHVLNNFASLVTQEGSSIGSDGTQDTDTDSDDDMQMSDTERDE

GO Analysis
1
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term cellular component organization
4
GO Category Biological Process
GO Term generation of precursor metabolites and energy
5
GO Category Biological Process
GO Term photosynthesis
6
GO Category Molecular Function
GO Term nuclease activity
7
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No