LOC_Os02g47280

Expression Profile

RGAP LOCUS ID LOC_Os02g47280
RAP-DB ID Os02g0701300
Function growth-regulating factor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization Nuclear
score 4.423

3) NUCPRED Prediction
localization Non Nuclear
score 0.59

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.48
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category GRF

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) GS2|OsGRF4|GL2|GLW2|LGS1
Function assigned as per literature GS2 enhances grain size and grain yield in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Nicotiana benthamiana leaf epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 26187814
Reference of localization https://www.cell.com/molecular-plant/fulltext/S1674-2052(15)00296-8
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.109
NLS score 0.3
Protein Sequence >LOC_Os02g47280.1 protein
MPPCLRRWPTTARPRQPRPPPSSPSAAPPRSPRKQREPAATTHFLGSSGACDNTVRRCVWVGGCRGGGGVAMGEDAPMTARWPPAAAARLPPFTAAQYEE
LEQQALIYKYLVAGVPVPPDLVLPIRRGLDSLAARFYNHPALGYGPYFGKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVETQLV
AQSQPPSSVVGSAAAPLAAASNGSSFQNHSLYPAIAGSNGGGGGRNMPSSFGSALGSQLHMDNAAPYAAVGGGTGKDLRYTAYGTRSLADEQSQLITEAI
NTSIENPWRLLPSQNSPFPLSSYSQLGALSDLGQNTPSSLSKVQRQPLSFFGNDYAAVDSVKQENQTLRPFFDEWPKGRDSWSDLADENANLSSFSGTQL
SISIPMASSDFSAASSRSTNGD

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term nucleus
2
GO Category Biological Process
GO Term multicellular organismal development
Presence of Splice variants YES