LOC_Os02g45570
| RGAP LOCUS ID | LOC_Os02g45570 | ||||
| RAP-DB ID | Os02g0678800 | ||||
| Function | growth regulating factor protein, putative, expressed | ||||
Sub-cellular Localization Predictions |
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1) WoLF-PSORT Prediction |
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| localization | Nuclear | ||||
| score | 8.5 | ||||
2) CELLO Prediction |
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| localization | Nuclear | ||||
| score | 2.373 | ||||
3) NUCPRED Prediction |
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| localization | Non Nuclear | ||||
| score | 0.1 | ||||
4) Y-Loc Prediction |
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| localization | Nuclear | ||||
| score | 58.05 | ||||
| confidence value | 0.43 | ||||
| Number Of Software Predicting Nucleus | 3 | ||||
| Seed Specific | No | ||||
| Transcription factor category | GRF | ||||
Experimental evidence for subcellular localization |
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| Published gene name (updated 1 January 2020) | OsGRF10 | ||||
| Function assigned as per literature | OsGRF10 repress Oskn2 promoter activity in planta | ||||
| Subcellular localization as per literature | Nucleus | ||||
| Cells used for localization experiment | Onion peel cells | ||||
| NUCLEAR or Not Nuclear | NUCLEAR | ||||
| PMID | 24532604 | ||||
| Reference of localization | http://www.plantphysiol.org/content/164/4/1952.long | ||||
| Is Subcellular localization evidence by author available ? | No | ||||
Sequence Analysis |
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| Number of PAT4 | 0 | ||||
| Number of PAT7 | 1 | ||||
| Number of Bipartite | 0 | ||||
| Basic residues % | 0.118 | ||||
| NLS score | -0.13 | ||||
| Protein Sequence | >LOC_Os02g45570.1 protein MDEEKEADSPQPPSKLPRLSGADPNAGVVTMAAPPPPVGLGLGLGLGGDSRGERDVEASAAAAHKATALTFMQQQELEHQVLIYRYFAAGAPVPVHLVLP IWKSVASSSFGPHRFPSLAVMGLGNLCFDYRSSMEPDPGRCRRTDGKKWRCSRDVVPGHKYCERHVHRGRGRSRKPVEASAAATPANNGGGGGIVFSPTS VLLAHGTARAT |
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GO Analysis |
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| 1 |
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| 2 |
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| Presence of Splice variants | YES | ||||