LOC_Os02g45160

Expression Profile

RGAP LOCUS ID LOC_Os02g45160
RAP-DB ID Os02g0673100
Function aluminum-activated malate transporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 3

2) CELLO Prediction
localization PlasmaMembrane
score 1.684

3) NUCPRED Prediction
localization Non Nuclear
score 0.03

4) Y-Loc Prediction
localization Cytoplasm
score 92
confidence value 0.52
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsALMT7
Function assigned as per literature OsALMT7 mediates malate transport and maintains panicle size and grain yield in rice
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Rice leaf sheath protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29610210
Reference of localization http://www.plantcell.org/content/30/4/889.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.094
NLS score -0.47
Protein Sequence >LOC_Os02g45160.1 protein
MDAAAREAQVQGSLEWRVTVPEGSSVTVEHEAGVAERAWAWVVRMLVAVRAAVAGFARKVWKIGADDPRRAVHSLKVGLALTLVSIVYYTRPVYDGVGGN
AMWAVMTVVVVFEYTVGGCMYKGFNRAVATASAGLLALGVNWVADKSGDKLEPFILSGSLFLLAAAATFSRFIPTVKARFDYGVTIFILTFSLVAVSGYR
VDQLLDLAQQRMSTIGIGIVICLAVCVVIWPVWAGQELHLLTVRNMEKLAGAVEGCVEDYFAAKPAAAKSEGYKCVLNSKASEDSQANLARWEPPHGRFG
FRHPYAQYTKVGAAMRHCAYCVEALNSCVRAEVQAPEHVKRLLGDVCTRLASQCARVLREASTSVAAMTSPKTLDFAVADMNTAVHELQGDLRALPPVLA
LEPAAEMSLMDAMPLFTVASLLIEISARIEGVVDAVETLASLASFKQVEDDDDKKGQTEMKVHPLNVPDDHDASTHESQTTTKHPEQV

GO Analysis
1
GO Category Biological Process
GO Term biological_process
2
GO Category Molecular Function
GO Term molecular_function
3
GO Category Cellular comBiological Processonent
GO Term cellular_component
Presence of Splice variants No