LOC_Os02g44990

Expression Profile

RGAP LOCUS ID LOC_Os02g44990
RAP-DB ID Os02g0671100
Function OsFBDUF13 - F-box and DUF domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 11

2) CELLO Prediction
localization Mitochondrial
score 1.214

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Cytoplasm
score 71
confidence value 0.2
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) MAIF1
Function assigned as per literature MAIF1 plays the negative role in response to abiotic stress possibly by regulating root growth
Subcellular localization as per literature Plasma membrane and nucleus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 21059694
Reference of localization https://www.cell.com/molecular-plant/fulltext/S1674-2052(14)60571-2
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.111
NLS score -0.47
Protein Sequence >LOC_Os02g44990.1 protein
MGEPPGKTGRRDAGGTAPAVEDRWTQLPPELLPLICKKLPDSADFVRFRTVCSAWRDAAPLSDVPPQLPWVVERRGSAFQARAHFRFYSPSSGRTYGVRG
YGGRSWLVMGGACQEHLVTTVDLSTTALYNPLTGERLALPPAPYPQWRHGVVHVVAAGRRRGGAPLVVNASTRTGHFGYCRQGDTKWTLVDGRQDMGHRA
YHGGRFYVNTNAQETLVIDASTGAVESVLPPPPRSADAGAGVSCGDYLVESRGKLIRAVLFPRDGVVTTSAEDYYLNVYQLQEDGKAAAAWAKVESVGDS
VLFFDKHGHGFSLEPNGAAELKRDCVYFMHEKRTWLDAGEYRFLCRYNMETGEVDRVVSLPDTFGDTWVVPGLCPSE

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No