LOC_Os02g43790

Expression Profile

RGAP LOCUS ID

LOC_Os02g43790

RAP-DB ID

Os02g0654700

Function

ethylene-responsive transcription factor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

Nuclear

score

2) CELLO Prediction

localization

Nuclear

score

2.731

3) NUCPRED Prediction

localization

Non Nuclear

score

0.6

4) Y-Loc Prediction

localization

Nuclear

score

99.89

confidence value

0.9

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

AP2-EREBP/ERF

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

AP59|OsBIERF3|OsAP59

Function assigned as per literature

OsBIERF3 may participate in disease resistance response and stress responses to abiotic factors

Subcellular localization as per literature

Nucleus

Cells used for localization experiment

Onion epidermis cells

NUCLEAR or Not Nuclear

NUCLEAR

PMID

16436304

Reference of localization

https://www.sciencedirect.com/science/article/pii/S0176161705004517?via%3Dihub

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.099

NLS score

0.84

Protein Sequence

>LOC_Os02g43790.1 protein
MLLNPASREVAALDSIRHHLLEEEEETPATAPAPTRRPVYCRSSSFGSLVADQWSESLPFRPNDAEDMVVYGALRDAFSSGWLPDGSFAAVKPESQDSYD
GSSIGSFLASSSSEAGTPGEVTSTEATVTPGIREGEGEAVAVASRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFDSAEEAAVAYDRAAYRMRGSR
ALLNFPLRIGSEIAAAAAAAAAGNKRPYPDPASSGSSSPSSSSSSSSSSSSGSPKRRKRGEAAAASMAMALVPPPPPPAQAPVQLALPAQPWFAAGPIQQ
LVS

GO Analysis

GO Category	Molecular Function
GO Term	DNA binding

GO Category	Cellular comBiological Processonent
GO Term	membrane

GO Category	Cellular comBiological Processonent
GO Term	nuclear envelope

GO Category	Biological Process
GO Term	biological_process

GO Category	Biological Process
GO Term	biosynthetic process

GO Category	Biological Process
GO Term	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

GO Category	Molecular Function
GO Term	sequence-specific DNA binding transcription factor activity

Presence of Splice variants