LOC_Os02g43010

Expression Profile

RGAP LOCUS ID LOC_Os02g43010
RAP-DB ID Os02g0644000
Function vacuolar-processing enzyme precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 6

2) CELLO Prediction
localization Cytoplasmic
score 1.92

3) NUCPRED Prediction
localization Non Nuclear
score 0.17

4) Y-Loc Prediction
localization Cytoplasm
score 51
confidence value 0.7
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsVPE3|REP-2
Function assigned as per literature OsVPE3 plays a crucial role in vacuole-mediated PCD and in stomatal development in rice
Subcellular localization as per literature Vacuoles
Cells used for localization experiment Onion cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 27900724
Reference of localization https://thericejournal.springeropen.com/articles/10.1186/s12284-016-0138-x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.103
NLS score -0.47
Protein Sequence >LOC_Os02g43010.1 protein
MAARWCFALLLALSAAAAGAGAKRTWEPVIRMPGEVVEEEVATVPRGSEGTEEEEKDGVGTRWAVLVAGSSGYGNYRHQADVCHAYQILRKGGLKEENIV
VFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGDEVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGGPGVLGMPNLPYLYAADFM
KVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTTASNAEESSWGTYCPGMEPSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVK
KRTSDMNSYGAGSHVMEYGDRTFKDDKLYLYQGFDPANAEVKNKLSWEGPKAAVNQRDADLLFLWRRYELLHDKSEEKLKALREISDTVMHRKLLDSSVD
LVGKLLFGFGNGPSVLQAVRPSGQPLVDDWDCLKRMVRIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSSHNSGRWSSLVQGYSA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term protein metabolic process
3
GO Category Molecular Function
GO Term hydrolase activity
4
GO Category Biological Process
GO Term cellular process
Presence of Splice variants YES