LOC_Os02g42880

Expression Profile

RGAP LOCUS ID LOC_Os02g42880
RAP-DB ID Os02g0642200
Function remorin C-terminal domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Nuclear
score 2.078

3) NUCPRED Prediction
localization Non Nuclear
score 0.17

4) Y-Loc Prediction
localization Cytoplasm
score 77
confidence value 0.83
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsREM1.4
Function assigned as per literature OsREM1.4 is a negative regulator of Rice stripe virus (RSV) infection
Subcellular localization as per literature Cytoplam
Cells used for localization experiment Nicotiana benthamiana leaf epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29229567
Reference of localization https://www.cell.com/molecular-plant/fulltext/S1674-2052(17)30366-0
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.197
NLS score -0.47
Protein Sequence >LOC_Os02g42880.1 protein
MAGEALKEAGATPAAANAGEEKAVIPAASTSPVISKTDDDTEPPADDSKALVVFVEKVADKPHAEKATATATPTRTSNDRDIALAKVETDKRESLIKAWE
ENEKAKAENRASKKLLDIISWENTKKAVIKTQLKKKEEELERKKAEYAEKAKNKEAIVHKEAEEKRAMVMARRGEEVIKAEEIAAKYRATGVTPKKHIGC
FGA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term biological_process
3
GO Category Molecular Function
GO Term binding
4
GO Category Cellular comBiological Processonent
GO Term plasma membrane
5
GO Category Cellular comBiological Processonent
GO Term vacuole
Presence of Splice variants No