LOC_Os02g42290

Expression Profile

RGAP LOCUS ID LOC_Os02g42290
RAP-DB ID Os02g0634500
Function OsClp3 - Putative Clp protease homologue, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Mitochondrial
score 1.904

3) NUCPRED Prediction
localization Non Nuclear
score 0.21

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.96
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCLP3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.097
NLS score -0.47
Protein Sequence >LOC_Os02g42290.3 protein
MTPSALAHLASASPLPAFSPKPRARPGSAAGPALRRLAVAAPAPRAYFSSSPMPYQPQPQQPAGYSSHQAFGLVPMVIETTSRGERAYDIFSRLLKERIV
LIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPNARVMIHQPSGGAQ
GQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEVIENRPASLIPEGATGVDLPHHSAAGVGGRGRDVEEPSAV

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term mitochondrion
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Cellular comBiological Processonent
GO Term plastid
4
GO Category Cellular comBiological Processonent
GO Term thylakoid
5
GO Category Molecular Function
GO Term binding
6
GO Category Biological Process
GO Term protein metabolic process
Presence of Splice variants YES