LOC_Os02g41890

Expression Profile

RGAP LOCUS ID LOC_Os02g41890
RAP-DB ID Os02g0629400
Function phytosulfokine receptor precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 4

2) CELLO Prediction
localization Extracellular
score 1.552

3) NUCPRED Prediction
localization Non Nuclear
score 0.27

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.21
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPSKR1
Function assigned as per literature OsPSKR1 functions as a candidate PSK receptor and regulates resistance to Xoc by activating the expression of pathogenesis-related genes involved in the SA pathway in rice
Subcellular localization as per literature cell membrane
Cells used for localization experiment epidermal cells of Nicotiana benthamiana (tobacco) leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 31388828
Reference of localization https://link.springer.com/article/10.1007%2Fs00425-019-03238-8
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.074
NLS score -0.47
Protein Sequence >LOC_Os02g41890.1 protein
MVCSLMMQLTTTWPWRFFFCLFFHLLFLFPTNSLNQSYCDPGDASALLGFMQGLSGSGSGWTVPNATSETANCCAWLGVKCNDGGRVIGLDLQGMKLRGE
LAVSLGQLDQLQWLNLSSNNLHGAVPATLVQLQRLQRLDLSDNEFSGEFPTNVSLPVIEVFNISLNSFKEQHPTLHGSTLLAMFDAGYNMFTGHIDTSIC
DPNGVIRVLRFTSNLLSGEFPAGFGNCTKLEELYVDLNSITGSLPDDLFRLSSLRDLSLQENQLSGRMTPRFGNMSSLSKLDISFNSFSGYLPNVFGSLG
KLEYFSAQSNLFRGPLPSSLSHSPSLKMLYLRNNSFHGQIDLNCSAMSQLSSLDLGTNKFIGTIDALSDCHHLRSLNLATNNLTGEIPNGFRNLQFLTYI
SLSNNSFTNVSSALSVLQGCPSLTSLVLTKNFNDGKALPMTGIDGFHNIQVFVIANSHLSGSVPSWVANFAQLKVLDLSWNKLSGNIPAWIGNLEHLFYL
DLSNNTLSGGIPNSLTSMKGLLTCNSSQQSTETDYFPFFIKKNRTGKGLRYNQVSSFPPSLILSHNMLIGPILPGFGNLKNLHVLDLSNNHISGMIPDEL
SGMSSLESLDLSHNNLTGSIPSSLTKLNFLSSFSVAFNNLTGAIPLGGQFSTFTGSAYEGNPKLCGIRSGLALCQSSHAPTMSVKKNGKNKGVILGIAIG
IALGAAFVLSVAVVLVLKSSFRRQDYIVKAVADTTEALELAPASLVLLFQNKDDGKAMTIGDILKSTNNFDQANIIGCGGFGLVYKATLPDGATIAIKRL
SGDFGQMEREFKAEVETLSKAQHPNLVLLQGYCRIGNDRLLIYSYMENGSLDHWLHEKPDGPSRLSWQTRLQIAKGAARGLAYLHLSCQPHILHRDIKSS
NILLDEDFEAHLADFGLARLICPYDTHVTTDLVGTLGYIPPEYGQSSVANFKGDVYSFGIVLLELLTGKRPVDMCKPKGARELVSWVLHMKEKNCEAEVL
DRAMYDKKFEMQMVQMIDIACLCISESPKLRPLTHELVLWLDNIGGSTEATK

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term signal transduction
3
GO Category Molecular Function
GO Term nucleotide binding
4
GO Category Biological Process
GO Term protein modification process
5
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
6
GO Category Biological Process
GO Term biosynthetic process
7
GO Category Cellular comBiological Processonent
GO Term cell
8
GO Category Molecular Function
GO Term kinase activity
9
GO Category Molecular Function
GO Term receptor activity
10
GO Category Molecular Function
GO Term binding
11
GO Category Molecular Function
GO Term signal transducer activity
12
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants No