LOC_Os02g41680

Expression Profile

RGAP LOCUS ID LOC_Os02g41680
RAP-DB ID Os02g0627100
Function phenylalanine ammonia-lyase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Cytoplasmic
score 1.76

3) NUCPRED Prediction
localization Non Nuclear
score 0.15

4) Y-Loc Prediction
localization Cytoplasm
score 94
confidence value 0.53
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) PAL|OsPAL4
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.104
NLS score -0.22
Protein Sequence >LOC_Os02g41680.1 protein
MECENGRVSANGMSGLCVAAPRADPLNWGKATEEMTGSHLDEVKRMVAEYRQPLVKIEGASLRIAQVAAVAAAGEARVELDESARERVKASSDWVMNSMM
NGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEAIAKLLNANVTPCLPLRGTITAS
GDLVPLSYIAGLVTGRENAVAVAPDGSKVNAAEAFKIAGIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAILAEVLSAVFCEVMNGKPEYTDH
LTHKLKHHPGQIEAAAIMEHILEGSSYMKHAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGT
PIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTDE
AIDILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVMTVAKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERALA
NGAAEFNADTSVFAKVAQFEEELRATLPGAIEAARAAVENGTAAIPSRITECRSYPLYRFVREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLE
CLKEWNGEPLPIC

GO Analysis
1
GO Category Biological Process
GO Term catabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term secondary metabolic process
4
GO Category Biological Process
GO Term response to stress
5
GO Category Molecular Function
GO Term catalytic activity
6
GO Category Biological Process
GO Term multicellular organismal development
7
GO Category Biological Process
GO Term metabolic process
8
GO Category Biological Process
GO Term response to abiotic stimulus
9
GO Category Cellular comBiological Processonent
GO Term cytoplasm
10
GO Category Biological Process
GO Term biosynthetic process
Presence of Splice variants No