LOC_Os02g40030

Expression Profile

RGAP LOCUS ID LOC_Os02g40030
RAP-DB ID Os02g0614100
Function transporter family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 5

2) CELLO Prediction
localization PlasmaMembrane
score 4.683

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Cytoplasm
score 38
confidence value 0.07
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNST1|BC14
Function assigned as per literature OsNST1 has pleiotropic effects on cell wall biosynthesis and plant growth. 
Subcellular localization as per literature Golgi body
Cells used for localization experiment rice protoplast cells 
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 21383162
Reference of localization http://www.pnas.org/content/pnas/early/2011/03/01/1016144108.full.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.075
NLS score -0.47
Protein Sequence >LOC_Os02g40030.1 protein
MAKGGGALLPMSAEAGKGNGGGGGGGDDAALFKGSAMTRRGAVAALSYMACSVLLVMFNKAALSSYNFPCANVITLLQMVCSTGLLYVLRRLKIISFTNS
EPSVPSDALFFVPFRILLRTTPLSLAYLLYMLASMESVRGVNVPMYTTLRRTTVVFTMTMEYFLAKQKHTPPIIGSVALIVFGAFIAGARDLSFDARGYA
IVFVANITTAVYLATINRIGKSSGLNSFGLMWCNGLVCGPSVLFLTYIQGDLKKAIEFPYLYSPGFQAVLLFSCMLAFLLNYTIFWNTILNSALTQSMCG
NLKDFFTVGIGWVLFGGLPFDLLNVIGQGLGFLGSGLYAYCKIKGK

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES