LOC_Os02g39340

Expression Profile

RGAP LOCUS ID LOC_Os02g39340
RAP-DB ID Os02g0606000
Function glycine-rich protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 12

2) CELLO Prediction
localization Nuclear
score 2.66

3) NUCPRED Prediction
localization Non Nuclear
score 0.42

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.47
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsDG2
Function assigned as per literature OsDG2 plays important roles in chloroplast development at early leaf stage of rice
Subcellular localization as per literature Chloroplasts
Cells used for localization experiment Tobacco leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 24430865
Reference of localization https://link.springer.com/article/10.1007%2Fs00299-013-1549-4
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.156
NLS score -0.22
Protein Sequence >LOC_Os02g39340.1 protein
MSYFTCKPNSGLIVDRPVAGLGRTGRLLSHPQYSLTTHSVRFPKLQKQVYPRLVLVAASQKKLPPLCASSGKVNPEAENDPFMESLKKAMDDAKKPRPIQ
DLLKEQIAKLREQGSGGGGGNRNRRGGSGDSGGPEDESFKESLDELVQVILATVAFILVYIHIIRGEELYRLARDYTRYLVTGKRTARLKRAMQKWRNFS
ESFMQSEGSQEDQYERAATSKPTWWQQPQKFVHLMEELCRGNWRPHAQES

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Cellular comBiological Processonent
GO Term plastid
4
GO Category Cellular comBiological Processonent
GO Term thylakoid
5
GO Category Cellular comBiological Processonent
GO Term nucleus
6
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES