LOC_Os02g39010

Expression Profile

RGAP LOCUS ID LOC_Os02g39010
RAP-DB ID Os02g0602100
Function cyclin-dependent kinase G-1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 12

2) CELLO Prediction
localization Nuclear
score 3.777

3) NUCPRED Prediction
localization Nuclear
score 0.82

4) Y-Loc Prediction
localization Nuclear
score 99.97
confidence value 0.87
Number Of Software Predicting Nucleus 4
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMSRPK1|Orysa;CDKG;1
Function assigned as per literature OsMSRPK1 is a riceCDK-like gene having role in plant development and their defense/stress signalling pathways
Subcellular localization as per literature nucleus and cytoplasm.
Cells used for localization experiment onion cells
NUCLEAR or Not Nuclear NUCLEAR
PMID not available
Reference of localization https://link.springer.com/article/10.1007/BF03030540
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 5
Number of PAT7 5
Number of Bipartite 0
Basic residues % 0.159
NLS score 2.97
Protein Sequence >LOC_Os02g39010.1 protein
MAAGSHGGYRGYEVAREREHDVGVSRRSKEHYHHRHPSRHRDSERRRDGGRSGGRELSNGYSHRRDSPRPPPRRRPSEGRTEDREPGEVSGGSGSERSGE
RPMKTGEPRENGVTRVSKEEAKMSPSKKRKQSPVIWDRNGSKRQARDPVRGIREVDAVVAEIIMHQSHSLPVMSSLSSIGDGHSPMILDVSVDKVQEYEK
NRIVDEEEEGYPTMRNILTSRWADAGDEEENVFVPKKKKSVSPVDSIERGSTKKVTSPESGEVLVYNSVRSSSRSSDSGVLQGSANRDLEVEKGDNIDVE
EAADDDYPAGHLLDSDFEGEDCRSETPECTRSPRRCINMLQGCRSVDEFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNIL
LSFHHPSIVEVKEVVVGSNDRDIFMVMEYMEHDLKGVMETMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGS
PLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRA
VSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFRELPLPRSKDFMPTFPALNEQDRRFKKHMKSPDPLEEQRMKEQGNNGDRGLFG

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term kinase activity
4
GO Category Molecular Function
GO Term nucleotide binding
5
GO Category Cellular comBiological Processonent
GO Term cytosol
6
GO Category Biological Process
GO Term protein modification process
Presence of Splice variants YES