LOC_Os02g38230

Expression Profile

RGAP LOCUS ID LOC_Os02g38230
RAP-DB ID Os02g0595900
Function high affinity nitrate transporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 7

2) CELLO Prediction
localization Extracellular
score 1.005

3) NUCPRED Prediction
localization Non Nuclear
score 0.07

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.59
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNAR2.1
Function assigned as per literature OsNAR2.1 protein are key amino acids in the interaction with OsNRT2.3a
Subcellular localization as per literature PM and cytoplasm
Cells used for localization experiment rice blade protoplasts and tobacco epidermis cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25103875
Reference of localization https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.12986
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.121
NLS score -0.16
Protein Sequence >LOC_Os02g38230.1 protein
MARLAGVAALSLVLVLLGAGVPRPAAAAAAKTQVFLSKLPKALVVGVSPKHGEVVHAGENTVTVTWSLNTSEPAGADAAFKSVKVKLCYAPASRTDRGWR
KASDDLHKDKACQFKVTVQPYAAGAGRFDYVVARDIPTASYFVRAYAVDASGTEVAYGQSSPDAAFDVAGITGIHASLKVAAGVFSTFSIAALAFFFVVE
KRKKDK

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Molecular Function
GO Term transporter activity
3
GO Category Biological Process
GO Term transport
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term biological_process
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No