LOC_Os02g36570

Expression Profile

RGAP LOCUS ID LOC_Os02g36570
RAP-DB ID Os02g0575500
Function ABC1 family domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Cytoplasmic
score 1.796

3) NUCPRED Prediction
localization Non Nuclear
score 0.58

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.32
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsABC1-2
Function assigned as per literature OsABC1-2 plays a role in regulating dark-induced senescence of plants
Subcellular localization as per literature Chloroplast envelope
Cells used for localization experiment Rice leaf protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 22548231
Reference of localization https://www.sciencedirect.com/science/article/pii/S0378111912002193
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.148
NLS score 0.33
Protein Sequence >LOC_Os02g36570.1 protein
MSAAAGAATLVASSASLSVPDHLRLRRFRLHLHPRPPPPHPQLRSRSLRQRRRFVLAVLQEDRSPSAPDEEARRYGLNGSAPSSGVGYDDAAVEAYLGTN
GNGRGNGAAAVVKPAAESRSSAALVSAGPGPGDDERRRKERVEEIGREDAWFKQSGGDSKPEVSVAPGGRWNRFKTYSTIQRTLEIWGFVFKFIFRSWLN
NQKFTYRGGMTEEKRVMRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETAVSIIEEELGASVNKIFDRFDFEPIAA
ASLGQVHRACLNGKEVVIKVQRPGLKELFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAFNAEKFSENFKNMDYVKVPEIL
WEYTTPQVLTMEYVPGIKINRIKQLDKLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYE
KDPDKVLQSMIQMGVLVPTGDMTAVRRTAQFFLDSFEERLAAQRKEREMATEELGFKKQLTKEEKFEKKKQRLAAIGEDLLSIAADQPFRFPATFTFVVR
AFSVLDGIGKGLDPRFDITEIAKPYAMELLRFNEAGVEVIVKDARKRWERQSRAFYNLFRQPDRVEKLAQIIERLEQGDLKLRVRTLESERAFQRVAAVQ
KTIGYGVAAGSLVNLATVLYLNSIRLPATIAYSLCAFFGLQVLVGLLKVKKLDQQERLITGTA

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Cellular comBiological Processonent
GO Term plastid
3
GO Category Molecular Function
GO Term transporter activity
Presence of Splice variants No