LOC_Os02g36140

Expression Profile

RGAP LOCUS ID LOC_Os02g36140
RAP-DB ID Os02g0570400
Function terpene synthase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 9

2) CELLO Prediction
localization Cytoplasmic
score 1.992

3) NUCPRED Prediction
localization Non Nuclear
score 0.38

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.85
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsDTC1|OsKS3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.095
NLS score -0.47
Protein Sequence >LOC_Os02g36140.2 protein
MMLLGSPSSGGYGGKFAGASPAGGTTTMAPSAKQPSSRAPPPGITGGRNDLRILSPAAAAAAVGGLEMKKPEAEGIAESLQATHRKELEASIRKQLQGVE
LSPSPYDTAWVAMVPLRGSSHNPSFPQCVDWILENQWDDGSWSIDGSISTANKDVLSSTLACVLALNKWNVGREHIRRGLSFIGRNFSIAMDDQAVAPIG
FGITFPAMLTLANGSGLEVPVRQNDIDSLNHLREMKIQREAGNHSRGRKAYMAYLAEGFGNLLEWDEIMMFQRKNGSLFNCPSSTAGALANYHDDKALQY
LQSLVNKFDGVVPTLYPLNIYCQLSMVDALENMGISQYFASEIKSILDMTYSSWLGKDEEIMLDVTTCAMAFRLLRMNGYDVSSDELSHVAGASGFRDSL
QGYLNDRKSVLEVYKTSKHSISENDLILDSIGSWSGSLLKEMLCSNGKGTPGREEIEFALKYPFYSTLERLVHRKNIVLFDAKGSQMLKTECMPVHDSQD
FLALAVDDFCISQSNYQNELNYLESWVKDNRLDQLHFARQKITYCYLSGAATTFRPEMGYARTSWARTAWLTAVIDDLFDVGGLEQEQENLLALMEKWEE
PGEDEYYSEDVKIVFQALYNTVNEIGAKASALQGHDVTKYLVDVWLHVVRCMKVEAEWQRSQHLPTFEEYMESGMVSLGQGCTVMSALFLIGEKLPEGIV
ELEEYDELFRLMGTCGRLLNDIRGIEREESDGKMTNGVSLLVHASGGSMSVDEAKTEVMKRIDASRRKLLSLVVSEQEGPIPRPCKQLFWKMCKILHLFY
YQTDGFSSPKEMVSAVDAVINEPLQLRLL

GO Analysis
1
GO Category Molecular Function
GO Term catalytic activity
2
GO Category Cellular comBiological Processonent
GO Term plastid
3
GO Category Biological Process
GO Term response to endogenous stimulus
4
GO Category Biological Process
GO Term signal transduction
5
GO Category Biological Process
GO Term biosynthetic process
6
GO Category Biological Process
GO Term cellular process
7
GO Category Biological Process
GO Term lipid metabolic process
Presence of Splice variants YES