| RGAP LOCUS ID |
LOC_Os02g34850 |
| RAP-DB ID |
Os02g0554000 |
| Function |
histone-lysine N-methyltransferase ASHH2, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
Nuclear |
| score |
9 |
2) CELLO
Prediction
|
| localization |
Nuclear |
| score |
3.983 |
3) NUCPRED
Prediction
|
| localization |
Nuclear |
| score |
0.84 |
4) Y-Loc
Prediction
|
| localization |
Nuclear |
| score |
99.99 |
| confidence value |
0.96 |
| Number Of Software Predicting Nucleus |
4 |
| Seed Specific |
No |
| Transcription factor category |
SET |
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
SDG725 |
| Function assigned as per literature |
SDG725-mediates H3K36 methylation and modulates brassinosteroid-related gene expression |
| Subcellular localization as per literature |
Nucleus |
| Cells used for localization experiment |
tobacco BY2 cells |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
22136623 |
| Reference of localization |
https://onlinelibrary.wiley.com/doi/full/10.1111/j.1365-313X.2011.04873.x |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
2 |
| Number of PAT7 |
0 |
| Number of Bipartite |
2 |
| Basic residues % |
0.133 |
| NLS score |
1.3 |
| Protein Sequence |
>LOC_Os02g34850.1 protein
MRKGRNVGKQECRKKDGKKGKNINKNRSSTKISSSEASKLVSFSNDSPSLDPSELLLHTRPPKFGSCSKVVTSAIHDVGMHGYDNMRPFGIDNDDEGSAF
DNVKSLRRKKKDSHGGKKGKVRDPHGKGRSKKKNIADNTYGLPAQLTDLSEPRMNKQSDLIPAAELVFKNSSAVSVELPAVVACKTDGASVPPAPAWVCC
DDCEKWRCIPTELADKISKENLRWTCKENEDKTFANCSIPQEKTDDEINAELGLSDASADEANGDGSNSKASGEPNFALLRSNLFLHRNRRTQSIDESMV
CNCKPPHDDRMGCRDGCLNRILNIECTKRTCPCGEHCSNQQFQRRTYAKLGKFHTGKKGYGLQLKEDVSEGRFLIEYVGEVLDITAYESRQRYYASKGQK
HFYFMALNGGEVIDACTKGNLGRFINHSCSPNCRTEKWMVNGEVCIGIFAMRNIKKGEELTFDYNYVRVSGAAPQKCFCGTAKCRGYIGGDISGADMITQ
DDAEAGTFEPMAVQEDAEEVLGANGLSSHGTHLDIVDHEASTKTEDSNDCPSVNPPELESEQQTSGTLFDTSEPENSLEALSPQDDEDVVRTPVHVSRTV
ESTSRQFPEYGTRSSEILQRAPCTLDGPKVPSTTNGIPPSSDLGSHWVPGFHANKKTNVKHHLILNPSSAPIDSEHILGVEGRLNSLLDVNGGISKRKDA
TNGYLKLLLVTAAEGDNAGGTSKSVRDLSLILDALLKTRSNSVLLDIINKNGLQMLHNILKQNKSDFHRIPIIRKLVKVCISFLCYVLLH |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
flower development |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
cellular component organization |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
protein modification process |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
lipid metabolic process |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
multicellular organismal development |
|
| 7 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
cell death |
|
| 9 |
| GO Category |
Biological Process |
| GO Term |
anatomical structure morphogenesis |
|
| 10 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleus |
|
| 11 |
| GO Category |
Biological Process |
| GO Term |
regulation of gene expression, epigenetic |
|
| 12 |
| GO Category |
Molecular Function |
| GO Term |
transferase activity |
|
| Presence of Splice variants |
No |
