| RGAP LOCUS ID |
LOC_Os02g33180 |
| RAP-DB ID |
Os02g0535400 |
| Function |
rar1, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
6 |
2) CELLO
Prediction
|
| localization |
Extracellular |
| score |
2.93 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.19 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
42 |
| confidence value |
0.13 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsRAR1 |
| Function assigned as per literature |
OsRAR1 functions in basal disease resistance to rice bacterial leaf blight caused by Xanthomonas oryzae pv. oryzae and fungal blast caused by Magnaporthe oryzae in a race-specific-like basal resistance manner. |
| Subcellular localization as per literature |
Cytoplasm and nucleus |
| Cells used for localization experiment |
Onion epidermal cells |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
18257679 |
| Reference of localization |
https://apsjournals.apsnet.org/doi/pdf/10.1094/MPMI-21-3-0294 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
1 |
| Number of PAT7 |
3 |
| Number of Bipartite |
0 |
| Basic residues % |
0.16 |
| NLS score |
0.98 |
| Protein Sequence |
>LOC_Os02g33180.1 protein
MFHDGMKQWSCCKQKSHDFSLFLAIPGCKTGKHTTEKPITKAVPTKPSKAVPVQTSKQSVGADTCSRCRQGFFCSDHGSQPKAQIPTATSDTNMVPVEKP
AVPPPKKKIDLNEPRVCKNKGCGKTYKEKDNHDEACDYHPGPAVFRDRIRGWKCCDIHVKEFDEFMEIPPCTKGWHNADAA |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cellular_component |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
response to biotic stimulus |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 5 |
| GO Category |
Molecular Function |
| GO Term |
protein binding |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
cell death |
|
| 7 |
| GO Category |
Molecular Function |
| GO Term |
binding |
|
| Presence of Splice variants |
No |
