LOC_Os02g32610

Expression Profile

RGAP LOCUS ID LOC_Os02g32610
RAP-DB ID Os02g0527600
Function protein kinase domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Nuclear
score 1.202

3) NUCPRED Prediction
localization Non Nuclear
score 0.35

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.01
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCTR2
Function assigned as per literature OsCTR2 is involved in the ethylene-receptor signalling and regulation of various aspects of rice growth and development
Subcellular localization as per literature Endoplasmic reticulum
Cells used for localization experiment Tobacco cells and Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 24006427
Reference of localization https://academic.oup.com/jxb/article/64/16/4863/590856
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.104
NLS score -0.47
Protein Sequence >LOC_Os02g32610.2 protein
MKADAKWPAMVLGGGGGGGRRASPGSAPPPAAPAAVAYSLLATSPPASIGNGGGSPHCDDGDASRGLGVADWLRLQRHSSGSSAGDDGDGFSSVSTLATA
DKGGDPADRPAGSSGGGGSKSWAQQAEEAYQLQLALALRLCSEASTAPDPNFLDSAVAAADDHHRDAPSPQSLSHRFWVNGSLSYSDKVLDGFYLIHGMD
PFVWTLCNDLRDGARVPSIESLKAMNPTESSVEVVLIDRVVDYDLRQLISTAIDVSRSRADSREITTRLAGIVSSKMGGSVASTEEHELCPRWRDSAGFL
KISSGSVVLPIGKLSIGLCRHRSLLFKTLADTISLPCRVVRGCRYCKSAGAASCLVHFGNDREYLIDLIGNPGFLSEPDSLLNGLSSISVSSPLRPPKYN
SADIVNNFKSLAKQYFLDCQSLNMMFNDPAAGTVVDLDEAMGSNIGPNLSPATNSDFQANFSHRSRGAQSSGQDGNFLIQKSSPEDTQSAQSDPFSDISL
DIEDLIIPWSELVLKEKIGAGSFGTVHRADWNGSDVAVKILMEQDFHPERLKEFLREVAIMKSLRHPNIVLFMGAVTQPPKLSIVTEYLSRGSLYRILHK
HGARENLDEKRRLSMAFDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKTAAGTPEWMAPEVIRDEPSNEKSDVYSFGV
ILWELMTLQQPWSTLNPAQVVAAVGFNGRRLEIPSSVDPKVAAIMESCWTKEPWRRPSFASIMESLKPLIRTPHQLQEDIS

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term response to endogenous stimulus
4
GO Category Biological Process
GO Term signal transduction
5
GO Category Biological Process
GO Term post-embryonic development
6
GO Category Biological Process
GO Term multicellular organismal development
7
GO Category Molecular Function
GO Term protein binding
8
GO Category Molecular Function
GO Term kinase activity
9
GO Category Biological Process
GO Term protein modification process
10
GO Category Biological Process
GO Term biological_process
11
GO Category Biological Process
GO Term biosynthetic process
12
GO Category Biological Process
GO Term lipid metabolic process
13
GO Category Cellular comBiological Processonent
GO Term membrane
14
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
Presence of Splice variants YES