LOC_Os02g32160

Expression Profile

RGAP LOCUS ID LOC_Os02g32160
RAP-DB ID Os02g0521300
Function copine, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization Cytoplasmic
score 2.094

3) NUCPRED Prediction
localization Non Nuclear
score 0.15

4) Y-Loc Prediction
localization Cytoplasm
score 89
confidence value 0.29
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsBON1
Function assigned as per literature OsBON1 and OsBON3 are critical suppressors of immunity
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Rice protoplasts ad Nicotiana bentamiana
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29356349
Reference of localization https://onlinelibrary.wiley.com/doi/epdf/10.1111/pbi.12890
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.087
NLS score -0.47
Protein Sequence >LOC_Os02g32160.1 protein
MGNCCSDEMGGGGGHAGRHSVGPAAAAAAAAAEAASAAADRFLRSRGAGASTQVELSLSASNLGDQEFFTKSNPMVIVYSKSKEGALEELGRTEVILNSL
NPSWNARINVHYQFEVLQPIVFQVYDIDPQFHDVNEKMLKLEEQQFLGEAVCLLSEVITKQNRLLTLKLGVSEHNLPNPSKFGELNVQAEESAGSKAIME
MVFRCSDLEIKDLLSKSDPFLLISRISESGVPVPICKTEVRKNDLNPKWKPVILNLQQIGSKENPLIIECFNFSSNGKHDLIGKIVKSVAELEKMYHSQD
GENFFVPASTAHDSHSKEVLKSQVYVEKYLENNRQTFLDYISAGCQLNFMVAVDFTASNGNPRLPDSLHYIDPTGRPNAYQRAILEVGDVLQYYDPAKRF
PSWGFGARPIDGPVSHCFNLNGSTYQPEVEGIQGIMSAYISALRNVSLAGPTLFGPVVSTATAIANQSLANNQQKYFVLLIVTDGVVTDFQETIDAIIKA
SDFPLSILVVGVGGADFKEMEFLDPNKGERLESSTGRVASRDMIQFAPMKDAHGSGISTVQSLLAEIPGQFMTYMRTREIQAIS

GO Analysis
1
GO Category Molecular Function
GO Term lipid binding
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term response to stress
4
GO Category Biological Process
GO Term response to abiotic stimulus
5
GO Category Biological Process
GO Term cellular component organization
6
GO Category Biological Process
GO Term cellular homeostasis
7
GO Category Biological Process
GO Term cell death
8
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No