LOC_Os02g31030

Expression Profile

RGAP LOCUS ID LOC_Os02g31030
RAP-DB ID Os02g0514500
Function glycerophosphoryl diester phosphodiesterase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10

2) CELLO Prediction
localization Cytoplasmic
score 2.45

3) NUCPRED Prediction
localization Non Nuclear
score 0.11

4) Y-Loc Prediction
localization Chloroplast
score 4
confidence value 0.1
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGDPD2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID 30307043
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.101
NLS score -0.22
Protein Sequence >LOC_Os02g31030.2 protein
MAQLKAARVADVPMALDVLAAGAPATSAILAEVDAAGARSAAAGGGGGGGGQRFAVIGHRGKGMNALASPDRRMQEVKENSLRSFNEAARFPVDYVEFDV
QVTKDGCPVIFHDNFIFTKEDGKILDKRVTDLQLEDFLLYGPQNEQGKGGKPLLRKLKDGRIVNWNVQSDDPLCTLQEAFEKVNPRLGFNIELKFDDNLE
YQEEELTCILQAILKVVFEYAKDRPIIFSSFQPDAAQVMRKLQSTYPVYFLTNGGTEIYADVRRNSLEEAIKLCLASGMQGIVSEARGIFRHPAAVPKIK
EANLSLLTYGTLNNVPEAVYMQHLMGVNGVIVDLVQEITEAVSELITVPEPDLNADNLSNGAAKDAATPHFSQCEISFLLRLIPELVQ

GO Analysis
1
GO Category Biological Process
GO Term carbohydrate metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term hydrolase activity
4
GO Category Biological Process
GO Term lipid metabolic process
Presence of Splice variants YES