LOC_Os02g30900

Expression Profile

RGAP LOCUS ID LOC_Os02g30900
RAP-DB ID Os02g0513000
Function protein kinase domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 5

2) CELLO Prediction
localization Nuclear
score 2.727

3) NUCPRED Prediction
localization Non Nuclear
score 0.4

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.06
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPBL1
Function assigned as per literature OsPBL1 is involved in antiviral defense signaling pathways in rice
Subcellular localization as per literature nucleus
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID not available
Reference of localization https://link.springer.com/article/10.1007/s10725-015-0036-z
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.129
NLS score -0.47
Protein Sequence >LOC_Os02g30900.1 protein
MGCFSCFDSPAEEQLNPKVGGPYGGGSSSSAAAAAYGGGGGSSAGRHGERGGGYPDLHHHHQQQQLPMAAPRVEKLSAGAEKTRVKSNAILREPSAPKDA
NGNVISAQTFTFRELATATRNFRPECFLGEGGFGRVYKGRLESTGQVVAIKQLNRDGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMH
FGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDESFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT
GQLTVKSDVYSFGVVLLELITGRRAIDSTRPHGEQNLVSWARPLFNDRRKLPKMADPRLEGRYPMRGLYQALAVASMCIQSEAASRPLIADVVTALSYLA
SQSYDPNAAHASRKPGGDQRSKVGENGRVVSRNDEASSSGHKSPNKDREDSPKEPPGILNKDFDRERMVAEAKMWGDRERMVAEAKMWGDRERMVAEAKM
WGENWRDKRRAIENGQGSLDSPTENG

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term cell
4
GO Category Biological Process
GO Term biosynthetic process
5
GO Category Biological Process
GO Term protein modification process
6
GO Category Molecular Function
GO Term kinase activity
7
GO Category Biological Process
GO Term response to stress
8
GO Category Biological Process
GO Term response to biotic stimulus
9
GO Category Molecular Function
GO Term protein binding
Presence of Splice variants No