LOC_Os02g29150

Expression Profile

RGAP LOCUS ID LOC_Os02g29150
RAP-DB ID Os02g0493100
Function OsFBO11 - F-box and other domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto_Nuclear
score 5

2) CELLO Prediction
localization Mitochondrial
score 2.05

3) NUCPRED Prediction
localization Non Nuclear
score 0.15

4) Y-Loc Prediction
localization Cytoplasm
score 84
confidence value 0.2
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRALyase
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.122
NLS score -0.13
Protein Sequence >LOC_Os02g29150.1 protein
MELGKEALVGVSMDHMRSSMQRGGLPPEMLEVGMELMRVLVGDSIPDPPVSTLPRLAPAAAARAPADGVDRISRLPDELLRDVVSRLPARDGARTAALST
RWRGVWHSVPLALVDAHLAPQGRGGGGVVAAVSRVLAAHPGPFRCAHLTTTSMEAHRGEVARWLEALAAKGVQDLVFVNRPWPLDLRLPAALFACSSLTR
LHVGVWRLPDTRAVPRGAAFPHLREMVLSCVVMEDRDLAFLLDRSPALEKLAIITCQDGARVRLTSRSLRILQVCLTVVNYVDVVDAPRLERLMLWMTSK
HRSCLSSMVKIRNAPKLRSLGFMEPGMHELEIGSTIIQAGMKLSPSTVVPSVKILALEVKFTVRYEARMLPSFLKCFPNVETLHIHSAVEDEPTGKSKLN
LKFWQDAGPIECVQHHIKKVIMREFRGTKSELTFLKFVAERARKLERMVVVVTNGCFCSSGCQGDTQAQMETLMASAKWASEGSKLVAFENPHSQVGTPA
WSFQFAFNFDWSDPFDYGYDQASLGEPVSKRKATELKSLGNKAVEKKDYLSATGFYSQAVDLYPDDATLFSNRSLCWHHMGDGHKALLDAYECRKLRPDW
LKAYYRQGAALMLLKDYESACETLYDGFKLDPGNSEMEDALRYPFCLFRPHYGSLFETDYLVD

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term biological_process
3
GO Category Molecular Function
GO Term binding
Presence of Splice variants YES