LOC_Os02g26700
| RGAP LOCUS ID | LOC_Os02g26700 | ||||
| RAP-DB ID | Os02g0465900 | ||||
| Function | cation transport regulator-like protein 1, putative, expressed | ||||
Sub-cellular Localization Predictions |
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1) WoLF-PSORT Prediction |
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| localization | cyto | ||||
| score | 9 | ||||
2) CELLO Prediction |
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| localization | Cytoplasmic | ||||
| score | 3.073 | ||||
3) NUCPRED Prediction |
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| localization | Non Nuclear | ||||
| score | 0.05 | ||||
4) Y-Loc Prediction |
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| localization | Cytoplasm | ||||
| score | 98 | ||||
| confidence value | 0.81 | ||||
| Number Of Software Predicting Nucleus | 0 | ||||
| Seed Specific | No | ||||
| Transcription factor category | |||||
Experimental evidence for subcellular localization |
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| Published gene name (updated 1 January 2020) | OsARP|OsCTP | ||||
| Function assigned as per literature | OsARP is a new type of proteinparticipating in Na+ uptake in vacuoles. | ||||
| Subcellular localization as per literature | Tonoplast | ||||
| Cells used for localization experiment | Rice and transgenic tobacco plants | ||||
| NUCLEAR or Not Nuclear | NOT NUCLEAR | ||||
| PMID | 18420595 | ||||
| Reference of localization | https://academic.oup.com/pcp/article/49/6/880/1811199 | ||||
| Is Subcellular localization evidence by author available ? | No | ||||
Sequence Analysis |
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| Number of PAT4 | 0 | ||||
| Number of PAT7 | 0 | ||||
| Number of Bipartite | 0 | ||||
| Basic residues % | 0.12 | ||||
| NLS score | -0.47 | ||||
| Protein Sequence | >LOC_Os02g26700.1 protein MVLWVFGYGSLIWNPGFDFDEKILGFVKGYKRTFNLACIDHRGTPEHPARTCTLESDEEAICWGIAYCVKGGLKKEQEAMKYLERRECEYDQKISVDFYK EGDSLKPAVTGVLVFVSTPDPVGNKYYLGPAPLEDMARQIATANGPNGNNRDYLFSMEKALSNICHEDDSIIELANEVRKVLSRPKEKITGSDSPQKSHA LVHLSALPEGTVVDSR |
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GO Analysis |
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| 1 |
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| 2 |
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| Presence of Splice variants | YES | ||||