LOC_Os02g24080

Expression Profile

RGAP LOCUS ID LOC_Os02g24080
RAP-DB ID Os02g0437200
Function SNARE domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 13.5

2) CELLO Prediction
localization Nuclear
score 3.513

3) NUCPRED Prediction
localization Non Nuclear
score 0.49

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.4
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSNAP32
Function assigned as per literature OsSNAP32 involved in the rice responses to biotic and abiotic stresses
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 17380428
Reference of localization https://link.springer.com/article/10.1007%2Fs11033-007-9064-8
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.146
NLS score -0.22
Protein Sequence >LOC_Os02g24080.4 protein
MCCSSLFFLPTTNSSDLSAEFHLCAETCLLRNLTQGVFEMSGRRSFFASKKPSRSSNPFDSDSDDGGREQRPARASSVPPPADQRGSLFGGGDGFSASSA
AARSRYRNDFRDTGGVEAQSVQELEGYAAYKAEETTQRVQGCVRIAEEMRDTASKSLVTIHQQGQQITRTHMMTLDIDQDLSRSEKLLGDLGGIFSKKWK
PKKNGEIRGPMLTRDDSFIRKGSHLEQRHKLGLSDHPPQSNARQFHSEPTSALQKVEMEKAKQDDGLSDLSNILTELKGMAVDMGTEIDRQTKALGDSEK
DYDELNFRIKGANTRARRLLGK

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Biological Process
GO Term response to external stimulus
3
GO Category Biological Process
GO Term response to abiotic stimulus
4
GO Category Cellular comBiological Processonent
GO Term cytoplasm
5
GO Category Biological Process
GO Term cellular component organization
6
GO Category Biological Process
GO Term cellular process
7
GO Category Biological Process
GO Term response to endogenous stimulus
8
GO Category Biological Process
GO Term transport
9
GO Category Biological Process
GO Term cell cycle
10
GO Category Biological Process
GO Term response to biotic stimulus
11
GO Category Cellular comBiological Processonent
GO Term plasma membrane
12
GO Category Cellular comBiological Processonent
GO Term cell
13
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES