LOC_Os02g22380

Expression Profile

RGAP LOCUS ID LOC_Os02g22380
RAP-DB ID Os02g0329800
Function glycosyltransferase protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Mitochondrial
score 1.408

3) NUCPRED Prediction
localization Non Nuclear
score 0.11

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.34
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGT61-1|XAX1
Function assigned as per literature XAX1 mediates xylosyltransfer to rice xylan
Subcellular localization as per literature Golgi apparatus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 23027943
Reference of localization http://www.pnas.org/content/109/42/17117.long#ref-44
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.106
NLS score -0.47
Protein Sequence >LOC_Os02g22380.1 protein
MTSTAYSRPSKLPGGGNGSDRRLPPRLMRGLTTKIEPKKLGVGLLAGCCLALLTYVSLAKLFAIYSPVFASTANTSALMQNSPPSSPETGPIPPQETAAG
AGNNDSTVDPVDLPEDKSLVEAQPQEPGFPSAESQEPGLPAALSRKEDDAERAAAAAASEIKQSEKKNGVAAGGDTKIKCDENGVDEGFPYARPSVCELY
GDVRVSPKQKTIYVVNPSGAGGFDENGEKRLRPYARKDDFLLPGVVEVTIKSVPSEAAAPKCTKQHAVPAVVFSVAGYTDNFFHDMTDAMIPLFLTTAHL
KGEVQILITNYKPWWVQKYTPLLRKLSNYDVINFDEDAGVHCFPQGYLGLYRDRDLIISPHPTRNPRNYTMVDYNRFLRDALELRRDRPSVLGEEPGMRP
RMLIISRAGTRKLLNLEEVAAAATELGFNVTVAEAGADVPAFAALVNSADVLLAVHGAGLTNQIFLPAEAVVVQIVPWGNMDWMATNFYGQPARDMQLRY
VEYYVGEEETSLKHNYSRDHMVFKDPKALHAQGWQTLAATIMKQDVEVNLTRFRPILLQALDRLQQ

GO Analysis
1
GO Category Molecular Function
GO Term transferase activity
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No