LOC_Os02g20930

Expression Profile

RGAP LOCUS ID LOC_Os02g20930
RAP-DB ID Os02g0313400
Function apoptosis inhibitor 5, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 5

2) CELLO Prediction
localization Nuclear
score 1.706

3) NUCPRED Prediction
localization Non Nuclear
score 0.43

4) Y-Loc Prediction
localization Nuclear
score 86.38
confidence value 0.92
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAPI5
Function assigned as per literature API5 is a positive regulator of tapetal programmed cell death in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Arabidopsis protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 21467577
Reference of localization http://www.plantcell.org/content/23/4/1416.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.149
NLS score -0.22
Protein Sequence >LOC_Os02g20930.1 protein
MAASDADAAEVERLYELGERLSSAKDKSQHAADYEAIISAVKGQSVKAKQLAAQLIPRFFRSFPALAPRAMEAMFDLVDMEELATRIQAIRGFPLLAKDA
EFVSKIADILGQLLASEENVERDAVHKALMSLIRQDVKSSLQPLFKHVESGSEIREKVICFLKDKVFPVKAELLKPQAEMERYITDLIKKSVLDVTGLEF
KLFMDFLRSLSIFGDSAPRESFQELIEIIQAQADLDAQFNVSDIDHIERWTSCMYMALPIFMRGGSSSKFLNYFVKQIVPVFDKIPEEKKLDLLKTVAAS
SPYATAQDARQLLPPVVQLLKKYMPGKKVEDINHNYVECLMYIFHHLAHKTPNTTNSLCGYKIVTGQPSDRLGEDFSEHYKDFTERLTGTEETVRAVSKR
LTQGMADFNKAISSAKTEEEKTKIKSDQQKSTMTMRAYNNILAMAQPLRAKSPLFIGDKKITLSWMEQPKKPAPTTTGGKRSQPATNGNTPASKKGRGEG
AARNQLVNRAFEGLSRGGRGSGRGRGRGGRGRGWGYR

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term cell death
3
GO Category Cellular comBiological Processonent
GO Term cytosol
4
GO Category Molecular Function
GO Term binding
Presence of Splice variants No