LOC_Os02g18840

Expression Profile

RGAP LOCUS ID LOC_Os02g18840
RAP-DB ID Os02g0290500
Function phosphatidylinositol 3- and 4-kinase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Cytoplasmic
score 2.042

3) NUCPRED Prediction
localization Non Nuclear
score 0.03

4) Y-Loc Prediction
localization Cytoplasm
score 72
confidence value 0.26
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsUbDKgamma4
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.11
NLS score -0.47
Protein Sequence >LOC_Os02g18840.1 protein
MSSAGIATLSPLLDQFCFAPHGEPRLQQLDSIVIFLAMPGVAPMPMRVLHSDSVASVKLRIQQFKGFVTTKQRLVFSGHELSLNNSHVRDYGLTDGNVLH
LVVRLADLRAISIETANGKKFQFQVESCCNVGYLKDKLSAESGQQLGSLKDQRLVFDGEELEDNQLIADISKKGAAVIHLFIRRPAKVQTQQGDKETVVT
VVTPKDNDNLQTDALNLAKPAKGKPAPVEPIIANGKVKLSPAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSGESNVAVFKPIDEEPMAKNNPRG
LPLSTDGEGLKRGTRVGEGALREVAAYILDHPVYGCKSCDVPGFSGVPPTALVRCFHMGKGSNKVGSLQLFVDNNGSCEDMGPRAFPVKEVQKIAILDIR
LANADRHAGNILVCQDGEDHLKLIPIDHGYCLPEKFEDCTFEWLYWPQAREPFGPETAAYIGSLDADKDIALLKFHGWALSPQCARVLRISTMLLKKGAE
RGLTPYDIGSILCRQTVKKESEIEAIIEEAEDAILPGTSEETFLETISEIMDFHLDKLAVKLKKF

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term cytosol
4
GO Category Molecular Function
GO Term kinase activity
Presence of Splice variants No