LOC_Os02g17500

Expression Profile

RGAP LOCUS ID LOC_Os02g17500
RAP-DB ID Os02g0274900
Function transporter family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6.5

2) CELLO Prediction
localization PlasmaMembrane
score 4.903

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.13
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGMST1
Function assigned as per literature OsGMST1 is a monosaccharide transporter that confers hypersensitivity to salt in rice
Subcellular localization as per literature Golgi Apparatus
Cells used for localization experiment Rice Protoplast
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 21613379
Reference of localization https://academic.oup.com/jxb/article/62/13/4595/491943
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.077
NLS score -0.47
Protein Sequence >LOC_Os02g17500.3 protein
MRWKLKSSAYKRVPSRDAAMDLDVETPAKMADGGAPSWRMSLPHVCVATLTSFLFGYHSGVVNEPLESISTDLGFAGNTLAEGLVVSICLGGAFVGCLFS
GSIADGIGRRRAFQLSALPMIIGAAVSALTNSLEGMLLGRFLVGTGMGLGPPVASLYITEVSPPSVRGTYGSFVQIATCLGIVVSLLIGTPVKDIDRWWR
VCFWVAAVPATLQALGMEFCAESPQWLYKCGRTTEAEIQFEKLLGPLHVKSAMAELSRSERGDDGENVKYSELFYGRNFNVVFIGTTLFALQQLSGINSV
FYFSSTVFRSVGVPPNLANICMGIANLSGSIVAMLLMDKLGRKVLLSGSFLGMAFAMGLQAVGANRHHLGSASVYLSVGGMLLFVLTFSLGAGPVPGLLL
PEIFPNKIRAKAMALCMSVHWVVNFFVSLLFLRLLEQLGPQVLYTMFSSACVVAAIFVRRHVVETKGKTLQEIEVSLLQTQ

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term transporter activity
Presence of Splice variants YES