LOC_Os02g16680

Expression Profile

RGAP LOCUS ID

LOC_Os02g16680

RAP-DB ID

Os02g0266800

Function

bZIP transcription factor domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

Nuclear

score

2) CELLO Prediction

localization

Nuclear

score

4.332

3) NUCPRED Prediction

localization

Non Nuclear

score

0.79

4) Y-Loc Prediction

localization

Nuclear

score

100

confidence value

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

bZIP

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

RITA1

Function assigned as per literature

Subcellular localization as per literature

Cells used for localization experiment

NUCLEAR or Not Nuclear

PMID

Reference of localization

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.094

NLS score

0.99

Protein Sequence

>LOC_Os02g16680.1 protein
MKKCPSELNFEAFFHGERGEDDADAAADQKPGGGPHPPPFAMFSAADLSSFGFADSVTSTITGVIPNHIWPQSQSLNARHPAVYTIESQSSICAAASPTS
ATTLNMKESQTLGGTSGSDSDSESLLDIEGGPCEQSTNPLDVKRMRRMVSNRESARRSRKRKQAHLADLETQVDQLRGENASLFKQLTDANQQFTTAVTD
NRILKSDVEALRVKVKMAEDMVARGALSCGLGHLGGLSPALNPRQGACRVPDVLTGLDYAGDDPFTGLSPPEQVQMPGGGEVGDAWGWDNHSNGAMSK

GO Analysis

GO Category	Molecular Function
GO Term	DNA binding

GO Category	Cellular comBiological Processonent
GO Term	nucleus

GO Category	Molecular Function
GO Term	protein binding

GO Category	Biological Process
GO Term	biosynthetic process

GO Category	Biological Process
GO Term	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

GO Category	Molecular Function
GO Term	sequence-specific DNA binding transcription factor activity

Presence of Splice variants

YES