LOC_Os02g15950

Expression Profile

RGAP LOCUS ID LOC_Os02g15950
RAP-DB ID Os02g0260200
Function OsFBK5 - F-box domain and kelch repeat containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 1.841

3) NUCPRED Prediction
localization Non Nuclear
score 0.44

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.62
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) EP3|LP
Function assigned as per literature LP plays an important role in regulating plant architecture, particularly in regulating panicle architecture
Subcellular localization as per literature Endoplasmic reticulum
Cells used for localization experiment Rice leaf protoplasts and onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 21447055
Reference of localization https://onlinelibrary.wiley.com/doi/epdf/10.1111/j.1467-7652.2011.00610.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.091
NLS score -0.47
Protein Sequence >LOC_Os02g15950.1 protein
MPLPSLLLPSPPPPLSLSAPSISLSPLSLSLSLSDLQSRSPEARLRLPSLLLLLQRAASEQPRRPPPPPPRPDGGGAGGAPSSGASPPNLGRNRIEGSCV
SYCAVRWMLAMGSEEWELYPSSFIGAQVIDYGHVSGDMDDDQSGDLAVSMDAVLPDDLLEKVLSFLPVASVIRSGSVCKRWHEIVHARRQTWSKMVPQKP
WYFMFTCSEEAVSGFTYDPSLRKWYGFDFPCIEKTTWSISSSSGLVCLMDSEDRSRIIVCNPITKDWKRLVDAPGGKSADYSALAISVTRTSHQYMVAVA
RCNQVPSEYYQWEFTIHLYESEINTWVSPFTELLIGWRGGDECVICDGVLYYLVYSTGVLVNNNEHRHCLLMYDLSTRPTHTSLMSMAIPVPCPLTCGRL
MNLNERLVLVGGIGKQDRPGIIKGIGIWELRNKEWHEVARMPHKFFQGFGEFDDVFASCGADDLIYIQSYGSPALLTFELNQKLWKWSLKSPVTKRFPLQ
LFTGFSFEPRLDIAS

GO Analysis
1
GO Category Biological Process
GO Term multicellular organismal development
2
GO Category Biological Process
GO Term protein modification process
3
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants No