| RGAP LOCUS ID |
LOC_Os02g15900 |
| RAP-DB ID |
Os02g0259600 |
| Function |
50S ribosomal protein L21, chloroplast precursor, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
11 |
2) CELLO
Prediction
|
| localization |
Chloroplast |
| score |
2.055 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.25 |
4) Y-Loc
Prediction
|
| localization |
Mitochondrion |
| score |
|
| confidence value |
0.49 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
ASL2 |
| Function assigned as per literature |
ASL2 plays an important role in chloroplast development during leaf development in rice |
| Subcellular localization as per literature |
Chloroplasts |
| Cells used for localization experiment |
Tobacco mesophyll cells |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
25280352 |
| Reference of localization |
https://onlinelibrary.wiley.com/doi/abs/10.1111/plb.12271 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
2 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.126 |
| NLS score |
0.15 |
| Protein Sequence |
>LOC_Os02g15900.1 protein
MATATLPLRLLASKTLAFPSAPSLPASRCSLPVAASAPRRCWRLLASAEEPAPAPVEAEAEAEVVEEEEVEEEEAAVPEPVEAQIAAAGAGKDADIFAVV
MIGSRQYIVMPGRYIYTQRLKGANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAVVEEQGRDDKVIVFKYKKKKKYQRKLGHRQPNTRLRITGISGY
EDFPADPILEYVPA |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
ribosome |
|
| 2 |
| GO Category |
Molecular Function |
| GO Term |
RNA binding |
|
| 3 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleus |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
response to abiotic stimulus |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
translation |
|
| 7 |
| GO Category |
Molecular Function |
| GO Term |
structural molecule activity |
|
| 8 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plastid |
|
| Presence of Splice variants |
No |
