LOC_Os02g15880

Expression Profile

RGAP LOCUS ID LOC_Os02g15880
RAP-DB ID Os02g0259100
Function CPuORF16 - conserved peptide uORF-containing transcript, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Nuclear
score 2.651

3) NUCPRED Prediction
localization Non Nuclear
score 0.64

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.62
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) IIP2
Function assigned as per literature uncharacterized protein that may be dounstream target of ILA1
Subcellular localization as per literature Nucleus
Cells used for localization experiment Rice protoplast
NUCLEAR or Not Nuclear NUCLEAR
PMID 22207574
Reference of localization http://www.plantcell.org/content/23/12/4334
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.136
NLS score -0.22
Protein Sequence >LOC_Os02g15880.1 protein
MDPRLGRSAFINFSNPNAYVGKFPVISTVSHPTASSQIDVLAHCSSYNLPRGTKRKFDGLSLGLGNSSSSESSKQSMGTGCTISSAKGSDDGSSIDLDLN
HFTLGNEGTSRLDKRACDSRRALDKPELNLELSLSSQSAITGADFTAATEYNSPSLQPYYMDLVPTVDEGSTSARRPSGCQVLSFLNKTAKMSEFSPREV
FPGSSNQSQGPAPMPTLLQLPKSPVACTSGLSRPQQRSSSTKNCTYPGCMKGARGSSGRCIAHGGGRRCQKDGCDKGAEGKTIFCKAHGGGRRCEHLGCT
KSAEGRTDFCIAHGGGRRCSHEGCKRAARGKSGRCIKHGGGKRCQHAGCTKSAEGRSGLCIAHGGGRRCQQDGCGKGAQGSTNFCKAHGGGKRCTHPDCK
KGAEGSTAFCKGHGGGKRCSAEGCTKSVHGGTLCCVAHGGGKRCVVEGCTKSARGRTDRCVGHGGGKRCQSSGCDKSAQGSTNFCKAHGGGKRCLWGHEG
SDHGAGDTPCERLARGKNGLCVYHNPQVDENRVHGGFSVVSDALSQGDRPSNTETSRCSIFSHPMEAPRRVAAPADEGRVHGGNILSMFANGMSLGKHPA
NQAEASTSAPRNSKSTNGMVTGNSAVRGSWL

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES